Publications 2020

University of Potsdam - Institute of Biochemistry and Biology- Bioinformatics group - Publications - 2020

Pott DM, de Abreu E Lima F, Soria C, Willmitzer L, Fernie AR, Nikoloski Z, Osorio S, Vallarino JG.
Metabolic reconfiguration of strawberry physiology in response to postharvest practices.
Food Chem. 2020 Aug 15;321:126747.

Correa SM, Alseekh S, Atehortúa L, Brotman Y, Ríos-Estepa R, Fernie AR, Nikoloski Z.
Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways.
Plant J. 2020 Jul 12.

Küken A, Gennermann K, Nikoloski Z.
Characterization of maximal enzyme catalytic rates in central metabolism of Arabidopsis thaliana.
Plant J. 2020 Jul 12.

Razaghi-Moghadam Z, Nikoloski Z.
Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data.
NPJ Syst Biol Appl. 2020 Jun 30;6(1):21

Rybak A, Bents D, Krüger J, Groth D.
The end of the secular trend in Norway: spatial trends in body height of Norwegian conscripts in the 19th, 20th and 21st century.
Anthropol Anz. 2020 Jun 26.

Razaghi-Moghadam Z, Nikoloski Z.
Supervised Learning of Gene Regulatory Networks.
Curr Protoc Plant Biol. 2020 Jun;5(2):e20106.

Hasibuan SN, Pulungan A, Scheffler C, Groth D, Hermanussen M. 
Environmental stimulation on height: The story from Indonesia.
Anthropol Anz. 2020 May 27.

Maqsood A, Naumenko DJ, Hermanussen M, Scheffler C, Groth D.
No correlation between short term weight gain and lower leg length gain in healthy German children.
Anthropol Anz. 2020 May 20.

Gryzik S, Hoang Y, Lischke T, Mohr E, Venzke M, Kadner I, Poetzsch J, Groth D, Radbruch A, Hutloff A, Baumgrass R.
Identification of a super-functional Tfh-like subpopulation in murine lupus by pattern perception.
Elife. 2020 May 22;9:e53226.

Tong H, Küken A, Nikoloski Z. 
Integrating molecular markers into metabolic models improves genomic selection for Arabidopsis growth.
Nat Commun. 2020 May 15;11(1):2410.

Nowak J, Gennermann K, Persson S, Nikoloski Z.
CytoSeg 2.0: automated extraction of actin filaments.
Bioinformatics. 2020 May 1;36(9):2950-2951.

Robaina-Estévez S, Nikoloski Z.
Flux-based hierarchical organization of Escherichia coli's metabolic network.
PLoS Comput Biol. 2020 Apr 20;16(4):e1007832.

Omidbakhshfard MA, Sujeeth N, Gupta S, Omranian N, Guinan KJ, Brotman Y, Nikoloski Z, Fernie AR, Mueller-Roeber B, Gechev TS.
A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress.
Int J Mol Sci. 2020 Jan 11;21(2).

Clemente-Moreno MJ, Omranian N, Sáez P, Figueroa CM, Del-Saz N, Elso M, Poblete L, Orf I, Cuadros-Inostroza A, Cavieres L, Bravo L, Fernie A, Ribas-Carbó M, Flexas J, Nikoloski Z, Brotman Y, Gago J.
Cytochrome respiration pathway and sulphur metabolism sustain stress tolerance to low temperature in the Antarctic species Colobanthus quitensis.
New Phytol. 2020 Jan;225(2):754-768.