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Publications 2020

University of Potsdam - Institute of Biochemistry and Biology- Bioinformatics group - Publications - 2020

Clemente-Moreno MJ, Omranian N, Sáez PL, Figueroa CM, Del-Saz N, Elso M, Poblete L, Orf I, Cuadros-Inostroza A, Cavieres LA, Bravo L, Fernie AR, Ribas-Carbó M, Flexas J, Nikoloski Z, Brotman Y, Gago J.
Low-temperature tolerance of the Antarctic species Deschampsia antarctica: A complex metabolic response associated with nutrient remobilization.
Plant Cell Environ, 2020 Jun;43(6):1376-1393

Correa SM, Alseekh S, Atehortúa L, Brotman Y, Ríos-Estepa R, Fernie AR, Nikoloski Z.
Model-assisted identification of metabolic engineering strategies for Jatropha curcas lipid pathways.
Plant J. 2020 Jul 12.

Correa SM, Fernie AR, Nikoloski Z, Brotman Y.
Towards model-driven characterization and manipulation of plant lipid metabolism.
Prog Lipid Res, 2020 Nov;80:101051

Dorjee B, Bogin B, Scheffler C, Groth D, Sen J, Hermanussen M.
Association of anthropometric indices of nutritional status with growth in height among Limboo children of Sikkim, India.
Anthropol Anz. 2020 May 13;77(5):389-398

Gryzik S, Hoang Y, Lischke T, Mohr E, Venzke M, Kadner I, Poetzsch J, Groth D, Radbruch A, Hutloff A, Baumgrass R.
Identification of a super-functional Tfh-like subpopulation in murine lupus by pattern perception.
Elife. 2020 May 22;9:e53226.

Hasibuan SN, Pulungan A, Scheffler C, Groth D, Hermanussen M.
Environmental stimulation on height: The story from Indonesia.
Anthropol Anz. 2020 May 27;77(5):423-429

Hermanussen M, Groth D, Scheffler C.
Statistical Approaches to Developmental and Growth Data of Children and Adolescents - an editorial to student research conducted during the International Student Summer School, July 2019, Potsdam and Gülpe, Germany.
Anthropol Anz. 2020 Aug 26;77(5):355-357

Küken A, Gennermann K, Nikoloski Z.
Characterization of maximal enzyme catalytic rates in central metabolism of Arabidopsis thaliana.
Plant J. 2020 Jul 12.

Lyall R, Nikoloski Z, Gechev, T.
Comparative Analysis of ROS Network Genes in Extremophile Eukaryotes.
Int J Mol Sci, 2020 Nov 30;21(23):9131

Maqsood A, Naumenko DJ, Hermanussen M, Scheffler C, Groth D.
No correlation between short term weight gain and lower leg length gain in healthy German children.
Anthropol Anz. 2020 May 20.

Martin L, Dorjee B, Groth D, Scheffler C.
Positive influence of parental education on growth of children - statistical analysis of correlation between social and nutritional factors on children's height using the St. Nicolas House Analysis.
Anthropol Anz. 2020 May 13;77(5):375-387

Nowak J, Gennermann K, Persson S, Nikoloski Z.
CytoSeg 2.0: automated extraction of actin filaments.
Bioinformatics. 2020 May 1;36(9):2950-2951.

Omidbakhshfard MA, Sujeeth N, Gupta S, Omranian N, Guinan KJ, Brotman Y, Nikoloski Z, Fernie AR, Mueller-Roeber B, Gechev TS.
A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress.
Int J Mol Sci. 2020 Jan 11;21(2).

Pott DM, de Abreu E Lima F, Soria C, Willmitzer L, Fernie AR, Nikoloski Z, Osorio S, Vallarino JG.
Metabolic reconfiguration of strawberry physiology in response to postharvest practices.
Food Chem. 2020 Aug 15;321:126747.

Razaghi-Moghadam Z, Nikoloski Z.
Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data.
NPJ Syst Biol Appl. 2020 Jun 30;6(1):21

Razaghi-Moghadam Z, Nikoloski Z.
Supervised Learning of Gene Regulatory Networks.
Curr Protoc Plant Biol. 2020 Jun;5(2):e20106.

Robaina-Estévez S, Nikoloski Z.
Flux-based hierarchical organization of Escherichia coli's metabolic network.
PLoS Comput Biol. 2020 Apr 20;16(4):e1007832.

Rybak A, Bents D, Krüger J, Groth D.
The end of the secular trend in Norway: spatial trends in body height of Norwegian conscripts in the 19th, 20th and 21st century.
Anthropol Anz. 2020 Jun 26;77(5):415-421

Tong H, Küken A, Nikoloski Z. 
Integrating molecular markers into metabolic models improves genomic selection for Arabidopsis growth.
Nat Commun. 2020 May 15;11(1):2410.