Journal articles
List of Journal articles
2025
Mechanisms for bump state localization in two-dimensional networks of leaky Integrate-and-Fire neurons
A Provata, J Hizanidis, K Anesiadis, OE Omelchenko
arXiv:2410.14256v2 [q-bio.NC] 29 Jan 2025
2024
Random walks of intermittently self-propelled particles
A. Datta, C. Beta, and R. Großmann
Phys. Rev. Research 6, 043281 – Published 16 December, 2024Bundling instability of lophotrichous bacteria in fluids
S. Lim, J. Park, Y. Kim, W. Lee, V. Pfeifer, V. Muraveva, C. Beta
APS Division of Fluid Dynamics Meeting Abstracts, T04. 002 - Published November, 2024Activity patterns in ring networks of quadratic integrate-and-fire neurons with synaptic and gap junction coupling
O.E. Omelchenko, C.R. Laing
Phys. Rev. E110, 034411 – Published 25 September, 2024Flagella and Cell Body Staining of Bacteria with Fluorescent Dyes
V. Pfeifer, V. Muraveva, C. Beta
Cell Motility and Chemotaxis: Methods and Protocols, 79-85 - First Online: 16 August, 2024A Hands-on Guide to AmoePy—a Python-Based Software Package to Analyze Cell Migration Data
T. Moldenhawer, D. Schindler, M. Holschneider, W. Huisinga, C. Beta
Cell Motility and Chemotaxis: Methods and Protocols, 159-184, First Online: 24 May, 2024Inferring Parameter Distributions in Heterogeneous Motile Particle Ensembles: A Likelihood Approach for Second Order Langevin Models
J. Albrecht, M. Opper, and R. Großmann
arXiv:2411.08692v1 [cond-mat.soft] 13 Nov 2024Phase reduction explains chimera shape: When multibody interaction matters
E.T.K. Mau, O.E. Omelchenko, M. Rosenblum
Phys. Rev. E110, L022201 – Published 22 August, 2024Manipulation of artificial and living small objects by light driven diffusioosmotic flow
V. Muraveva, N. Lomadze, Y. D. Gordievskaya, P. Ortner, C. Beta, and S. Santer
Scientific Reportsvolume 14, Article number: 18342 (2024) - Published 07 August, 2024Chemically induced dislocation and mutation of essential cytoskeletal proteins: A case study focusing on Coronin-A
M. B. Stange, R. Großmann, S. Flemming, M. Grebe, and C. Beta
bioRxiv posted August 5, 2024Intermittent Run Motility of Bacteria in Gels Exhibits Power-Law Distributed Dwell Times
A. Datta, S. Beier, V. Pfeifer, R. Großmann, and C. Beta
arXiv:2408.02317v1 [cond-mat.soft] 5 Aug 2024Hopf bifurcations of twisted states in phase oscillators rings with nonpairwise higher-order interactions
C. Bick, T. Böhle, O.E. Omelchenko
Journal of Physics: Complexity 5 (2), 025026 - Published 20 June 2024The random walk of intermittently self-propelled particles
A. Datta, C. Beta, and R. Großmann
arXiv:2406.15277v1 [cond-mat.soft] 21 Jun 2024A minimal physical model for curvotaxis driven by curved protein complexes at the cell’s leading edge
R.K. Sadhu, M. Luciano, W. Xi, C. Martinez-Torres, M. Schröder, C. Blum, C. Beta et all
Proceedings of the National Academy of Sciences121 (12), e2306818121 - Published 15 March, 2024Robust parameter estimation for partially observed second-order diffusion processes
J. Albrech and S. Reich
arXiv:2406.14738v1 [stat.ME] 20 Jun 2024Non-Gaussian displacements in active transport on a carpet of motile cells
R. Großmann, L. S. Bort, T. Moldenhawer, S. Sharifi Panah, R. Metzler, and C. Beta
Phys. Rev. Lett.132, 088301 – Published 23 February 2024
arXiv:2311.05377v1 [cond-mat.soft] 9 Nov 2023Three-component contour dynamics model to simulate and analyze amoeboid cell motility in two dimensions
D. Schindler, T. Moldenhawer, C. Beta, W. Huisinga, M. Holschneider
Plos one19 (1), e0297511 - Published 26 January, 2024Cargo Size Limits and Forces of Cell‐Driven Microtransport
S. Sharifi Panah, R. Großmann, V. Lepro, C. Beta
Small20 (11), 2304666 - First published: 07 November, 2023
2023
Black and gray box learning of amplitude equations: Application to phase field systems
F.P. Kemeth, S. Alonso, B. Echebarria, T. Moldenhawer, C. Beta, and I.G. Kevrekidis,
Physical Review E 107 (2), 025305, 2023From actin waves to mechanism and back: How theory aids biological understanding
C. Beta, L. Edelstein-Keshet, N. Gov, and A. Yochelis,
Elife 12, e87181, 2023Cargo size limits and forces of cell-driven microtransport
S. Sharifi Panah, R. Großmann, V. Lepro, and C. Beta,
Small published by Wiley-VCH GmbH 2023, 2304666
arXiv:2305.15298v1 [physics.bio-ph] 24 May 2023Ferroelectrets: Heterogenous polymer electrets with high piezoelectric sensitivity for transducers
X. Qiu, P. Fang, A. Mellinger, R. A. P. Altafim, W. Wirges, G. Gidion, and D. Rychkov,
Jornal of Advanced DielectricsPeriodic orbits in the Ott-Antonsen manifold
O. E. Omel´chenko
Nonlinearity 36, 845-861 (2023)Transient chimera states emerging from dynamical trapping in chaotic saddles
E. S. Medeiros, O. Omel´chenko, and U. Feudel,
Chaos 33, 093130 (2023)
arXiv:2307.06918v1 [nlin.CD] 13 Jul 2023Traveling spiral wave chimeras in coupled oscillator systems: emergence, dynamics, and transitions
M. Bataille-Gonzalez, M. G. Clerc, E. Knobloch, and O. E. Omel´chenko,
New J. Phys. 25, 103023 (2023)Periodic solutions in next generation neural field models
C. R. Laing and O. E. Omel´chenko,
Biol. Cybern. 117, 259-274 (2023)
arXiv:2306.10398v1 [nlin.AO] 17 Jun 2023
2022
- Role of the two flagellar stators in swimming motility of Pseudomonas putida
V. Pfeifer, S. Beier, Z. Alirezaeizanjani, and C. Beta,
ASM Journals, November/December 2022, Volume 13, Issue 6, e02182-22. - Versatile Patterns in the Actin Cortex of Motile Cells: Self-Organized Pulses Can Coexist with Macropinocytic Ring-Shaped Waves
A. Yochelis, S. Flemming, and C. Beta,
Phys. Rev. Lett. 129, 088101 – Published 19 August 2022. - Wrapped Up: The Motility of Polarly Flagellated Bacteria
K. M. Thormann, C. Beta, and M. J. Kühn,
Annu. Rev. Microbiol. 2022. - Spontaneous transitions between amoeboid and keratocyte-like modes of migration
T. Moldenhawer, E. Moreno, D. Schindler, S. Flemming, M. Holschneider, W. Huisinga, S. Alonso, and C. Beta,
Front. Cell Dev. Biol., 30 September 2022. - Optimal Cargo Size for Active Diffusion of Biohybrid Microcarriers
V. Lepro, R. Großmann, S. Sharifi Panah, O. Nagel, S. Klumpp, R. Lipowsky, and C. Beta,
Phys. Rev. Applied 18, 034014 – Published 7 September 2022. - Unravelling the origins of anomalous diffusion: From molecules to migrating storks
O. Vilk, E. Aghion, T. Avgar, C. Beta, O. Nagel, A. Sabri, R. Sarfati, D. K. Schwartz, M. Weiss, D. Krapf, R. Nathan, R. Metzler, and M. Assaf,
Phys. Rev. Research 4, 033055 – Published 18 July 2022.
arXiv:2109.04309v3 [physics.data-an] 27 Jun 2022 - Interplay of diffusio- and thermo-osmotic flows generated by single light stimulus
V. Muraveva, M. Bekir, N. Lomadze, R. Großmann, C. Beta, and S. Santer,
Appl. Phys. Lett. 120, 231905 (2022). - From single to collective motion of social amoebae: a computational study of interacting cells
E. Moreno, R. Großmann, C. Beta, and S. Alonso,
Front. Phys., 02 February 2022. - Electrophoretic µPAD for Purification and Analysis of DNA Samples
N. Heinsohn, R. Niedl, A. Anielski, F. Lisdat, and C. Beta,
Biosensors2022, 12(2), 62.
2002-2021
- G. Pasemann, S. Flemming, S. Alonso, C. Beta, and W. Stannat, Journal of Nonlinear Science volume 31, Article number: 59 (2021).
- D. Schindler, T. Moldenhawer, M. Stange, V. Lepro, C. Beta, M. Holschneider, and W. Huisinga, PLoS computational biology 17 (8), e1009268, (2021).
- R. Großmann, I. S. Aranson, and F. Peruani, Nature Communications, 11, 5365 (2020) .
- L. Gómez Nava, R. Großmann, M. Hintsche, C. Beta, and F. Peruani, EPL (Europhysics Letters), Volume 130, Number 6, (2020).
- C. Beta , N. S. Gov and A. Yochelis, Cells 2020, 9(6), 1533, (2020). We acknowledge the support of the Deutsche Forschungsgemeinschaft and Open Access Publishing Fund of University of Potsdam.
- M. Bär, R. Großmann, S. Heidenreich, and F. Peruani, Annu. Rev. Condens. Matter Phys. 2020, 11, 441-466, (2020).
- Z. Alirezaeizanjani, R. Großmann, V. Pfeifer, M. Hintsche, and C. Beta, Sci. Adv., 6 (22), eaaz6153, (2020).
- J. Negrete, Jr. , A. Pumir, C. Westendorf, M. Tarantola, E. Bodenschatz, and C. Beta, Phys. Rev. R. 2, 013239, (2020).
- S. Flemming , F. Font, S. Alonso, and C. Beta, PNAS, 6337, Vol 117, No. 12 (2020).
- A. Yochelis, C. Beta and N. S. Gov, Phys. Rev. E 101, 022213, (2020).
- A. Weber, M. Bahrs, Z. Alirezaeizanjani, X. Zhang, C. Beta and V. Zaburdaev, frontiers in Physics, (2019).
- H. F. Hsu, A. Krekhov, M. Tarantola, C. Beta and E. Bodenschatz, New Journal of Physics 21, 113055, (2019).
- O. Nagel, M. Frey, M. Gerhardt and C. Beta, Advanced Science 6 (3), 1801242, (2019).
- M. Seyrich, Z. Alirezaeizanjani, C. Beta, H. Stark, New J. Phys. 20, 103033 (2018).
- A. G. Cherstvy, O. Nagel, C. Beta, R. Metzler, Phys. Chem. Chem. Phys. 20, 23034-23054 (2018).
- S. Alonso, M. Stange, C. Beta, PLoS ONE 13(8), e0201977 (2018).
- M. Hintsche, V. Waljor, R. Großmann, M. J. Kühn, K. M. Thormann, F. Peruani, and C. Beta, Scientific Reports 7, Article number: 16771 (2017)
- M. Stange, M. Hintsche, K. Sachse, M. Gerhardt, A. Valleriani, and C. Beta, J. Phys. D: Appl. Phys. 50 464001 (8pp) (2017)
- H.-F. Hsu, E. Bodenschatz, C.Westendorf, A. Gholami, A. Pumir, M. Tarantola, and C. Beta, Phys. Rev. Lett. 119, 148101 (2017)
- A. Anielski, E.K.B. Pfannes, and C. Beta, Review of Scientific Instruments 88, 034301 (2017).
- O. Pohl, M. Hintsche, Z. Alirezaeizanjani, M. Seyrich, C. Beta, and H. Stark, PLOS Comput Biol 13(1): e1005329 (2017).
- C. Beta, K. Kruse, Annual Review of Condensed Matter Physics Vol. 8, 239-264 (2017).
- I. Berenstein, C. Beta, and Y. De Decker, Phys. Rev. E 94, 046201 (2016).
- J. Negrete Jr., A. Pumir, H.-F. Hsu, C. Westendorf, M. Tarantola, C. Beta, and E. Bodenschatz, Phys. Rev. Lett. 117, 148102 (2016).
- C. Beta, New J. Phys. 18 051003 (2016).
- R. Niedl, I. Berenstein, and C. Beta, Physical Chemistry Chemical Physics 18, 6451 - 6457 (2016).
- H. Leonhardt, M. Gerhardt, N. Höppner, K. Krüger, M. Tarantola, and C. Beta, Phys. Rev. E 93, 012414 (2016).
- M. Raatz, M. Hintsche, M. Bahrs, M. Theves, and C. Beta, Eur. Phys. J. ST 224, 1185-1198 (2015).
- R. Niedl and C. Beta, Lab on a Chip 15, 2452 - 2459 (2015).
- M. Theves, J. Taktikos, V. Zaburdaev, H. Stark, and C. Beta, EPL 109, 28007 (2015).
- O. Nagel, C. Guven, M. Theves, M. Driscoll, W. Losert and C. Beta, PLoS ONE 9 (12), e113382 (2014).
- M. Gerhardt, M. Walz, and C. Beta, J. Cell Sci. 127, 5115-5125 (2014).
- N. Makarava, S. Menz, M. Theves, W. Huisinga, C. Beta, and M. Holschneider, Phys. Rev. E 90, 042703 (2014).
- M. Gerhardt, M. Ecke, M. Walz, A. Stengl, C. Beta, and G. Gerisch, J. Cell Sci. 127, 4507-4517 (2014).
- M. Stich, A. Casal, and C. Beta. Phys. Rev. E 88, 042910 (2013).
- E. K. B. Pfannes, A. Anielski, M. Gerhardt, and C. Beta, Integr. Biol. 5 (12), 1456-1463 (2013).
- M. Theves, J. Taktikos, V. Zaburdaev, H. Stark, and C. Beta, Biophys. J. 105 (8), 1915-1924 (2013).
- I. Berenstein and C. Beta. Chaos 23, 033119 (2013).
- C. Westendorf, J. Negrete Jr., A.J. Bae, R. Sandmann, E. Bodenschatz, and C. Beta, PNAS 110, 3853-3858 (2013).
- I. Berenstein, Chaos 22, 043109 (2012).
- I. Berenstein and C. Beta, Phys. Rev. E 86, 056205 (2012).
- A. Anielski, E.K.B. Pfannes, and C. Beta J. Comput. Interdisc. Sci. 3, 99-106 (2012).
- G. Amselem, M. Theves, A. Bae, C. Beta, and E. Bodenschatz, Phys. Rev. Lett. 109, 108103 (2012).
- I. Berenstein, Chaos 22, 023112 (2012).
- G. Amselem, M. Theves, A. Bae, E. Bodenschatz, and C. Beta, PLoS ONE 7(5), e37213 (2012).
- E.K.B. Pfannes, M. Theves, C. Wegner, and C. Beta, J. Muscle Res. Cell Motil. 33, 95-106 (2012).
- Spatiotemporal chaos arising from standing waves in a reaction-diffusion system with cross-diffusionI. Berenstein and C. Beta, J. Chem. Phys. 136, 034903 (2012).
- I. Berenstein and C. Beta, J. Chem. Phys. 135, 164901 (2011).
- C. Beta and E. Bodenschatz, Eur. J. Cell Biol. 90, 811-816 (2011).
- E. Schäfer, C. Westendorf, E. Bodenschatz, C. Beta, B. Geil and A. Janshoff, Small 7, 723-726 (2011).
- K. Giewekemeyer S. P. Krüger, S. Kalbfleisch, M. Bartels, C. Beta and T. Salditt, Phys. Rev. A 83, 023804 (2011).
- C. Beta. PMC Biophysics 3, 12 (2010).
- M. Stich and C. Beta, Physica D 239, 1681-1691 (2010).
- C. Westendorf, A.J. Bae, C. Erlenkamper, E. Galland, C. Franck, E. Bodenschatz, and C. Beta, PMC Biophysics, 3, 9 (2010).
- H.U. Bödeker, C. Beta, T.D. Frank, and E. Bodenschatz, EPL 90, 28005 (2010).
- D. Krefting and C. Beta, Phys. Rev. E 81, 036209 (2010).
- A. Bae, C. Beta, and E. Bodenschatz, Lab on a Chip 9, 3059-3065 (2009).
- C. Beta, G. Amselem, and E. Bodenschatz, New J. Phys. 10, 083015 (2008).
- C. Beta, T. Fröhlich, H. Bödeker, and E. Bodenschatz, Lab on a Chip 8, 1087-1096 (2008).
- C. Punckt, M. Stich, C. Beta, and H.H. Rotermund, Phys. Rev. E 77, 046222 (2008).
- M. Stich, C. Punckt, C. Beta, and H.H. Rotermund, Phil. Trans. R. Soc. A 366, 419-426 (2008).
- C. Beta, D. Wyatt, W.-J. Rappel, and E. Bodenschatz Anal. Chem. 79, 3940-3944 (2007).
- P.S. Bodega, P. Kaira, C. Beta, D. Krefting, D. Bauer, B. Mirwald-Schulz, C. Punckt, and H.H. Rotermund, New J. Phys. 9, 61 (2007).
- C. Beta, A.S. Mikhailov, H.H. Rotermund, and G. Ertl, Europhys. Lett. 75, 868-874 (2006).
- L. Song, S.M. Nadkarni, H.U. Bödeker, C. Beta, A. Bae, C. Franck, W.-J. Rappel, W.F. Loomis, and E. Bodenschatz, Eur. J. Cell Biol. 85, 981-989 (2006).
- H. Varela, C. Beta, A. Bonnefont, and K. Krischer, Phys. Chem. Chem. Phys. 7, 2429-2439 (2005).
- H. Varela, C. Beta, A. Bonnefont, and K. Krischer, Phys. Rev. Lett. 94, 174104 (2005).
- C. Beta and A.S. Mikhailov, Physica D 199, 173-184 (2004).
- C. Beta, M.G. Moula, A.S. Mikhailov, H.H. Rotermund, and G. Ertl, Phys. Rev. Lett. 93, 188302 (2004).
- J. Wolff, M. Stich, C. Beta, and H.H. Rotermund, J. Phys. Chem. B 108, 14282-14291 (2004).
- M. Bertram, C. Beta, H.H. Rotermund, and G. Ertl, J. Phys. Chem. B 107, 9610-9615 (2003).
- C. Beta, K. Schneider, and M. Farge, Commun. Nonlin. Sci. Num. Sim. 8, 537-545 (2003).
- C. Beta, M. Bertram, A.S. Mikhailov, H.H. Rotermund, and G. Ertl, Phys. Rev. E, 67, 046224 (2003).
- C. Beta, K. Schneider, M. Farge, and H. Bockhorn, Chem. Engin. Sci. 58, 1463-1477 (2003).
- M. Bertram, C. Beta, M. Pollmann, A.S. Mikhailov, H.H. Rotermund, and G. Ertl, Phys. Rev. E, 67, 036208 (2003).
- C. Beta, K. Schneider, M. Farge, and H. Bockhorn, Chem. Ing. Tech., 74, 1441-1444 (2002).