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Publications 2010


S. Andorf, J. Selbig, T. Altmann, K. Poos, H. Witucka-Wall and D. Repsilber (2010)
Enriched partial correlations in genome-wide gene expression profiles of hybrids (A. thaliana): a systems biological approach towards the molecular basis of heterosis.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 120, 249–259.

V. Bischoff, J. Selbig and W.-R. Scheible (2010)
Involvement of TBL/DUF231 proteins into cell wall biology.
Plant Signaling \& Behavior 5, 1057–1059.

D. Groth, S. Hartmann, M. Friemel, N. Hill, S. Müller, A.J. Poustka and G. Panopoulou (2010)
Data integration using scanners with SQL output-the bioscanners project at sourceforge.
Journal of integrative bioinformatics 7.

M. Hische, O. Luis-Dominguez, A.F.H. Pfeiffer, P.E. Schwarz, J. Selbig and J. Spranger (2010)
Decision trees as a simple-to-use and reliable tool to identify individuals with impaired glucose metabolism or type 2 diabetes mellitus.
European journal of endocrinology / European Federation of Endocrine Societies 163, 565–571.

J. Hummel, N. Strehmel, J. Selbig, D. Walther and J. Kopka (2010)
Decision tree supported substructure prediction of metabolites from GC-MS profiles.
Metabolomics 6, 322–333.

S. Jozefczuk, S. Klie, G. Catchpole, J. Szymanski, A. Cuadros-Inostroza, D. Steinhauser, J. Selbig and L. Willmitzer (2010)
Metabolomic and transcriptomic stress response of Escherichia coli.
Molecular systems biology 6, 364.

S. Klie, Z. Nikoloski and J. Selbig (2010)
Biological Cluster Evaluation for Gene Function Prediction.
Journal of Computational Biology.

M. Korn, T. Gärtner, A. Erban, J. Kopka, J. Selbig and D.K. Hincha (2010)
Predicting Arabidopsis Freezing Tolerance and Heterosis in Freezing Tolerance from Metabolite Composition.
Molecular Plant 3, 224–235.

M. Lohse, A. Nunes-Nesi, P. Krüger, A. Nagel, J. Hannemann, F.M. Giorgi, L. Childs, S. Osorio, D. Walther, J. Selbig, N. Sreenivasulu, M. Stitt, A.R. Fernie and B. Usadel (2010)
Robin: An Intuitive Wizard Application for R-Based Expression Microarray Quality Assessment and Analysis.
Plant Physiology 153, 642–651.

R. Meyer, B. Kusterer, J. Lisec, M. Steinfath, M. Becher, H. Scharr, A. Melchinger, J. Selbig, U. Schurr, L. Willmitzer and T. Altmann (2010)
QTL analysis of early stage heterosis for biomass in Arabidopsis.
TAG Theoretical and Applied Genetics 120, 227–237.

Z. Nikoloski, P. May and J. Selbig (2010)
Algebraic connectivity may explain the evolution of gene regulatory networks.
Journal of Theoretical Biology 267, 7–14.

D. Repsilber, S. Kern, A. Telaar, G. Walzl, G.F. Black, J. Selbig, S.K. Parida, S.H.E. Kaufmann and M. Jacobsen (2010)
Biomarker discovery in heterogeneous tissue samples -taking the in-silico deconfounding approach.
BMC bioinformatics 11, 27.

D. Riaño-Pachón, S. Kleessen, J. Neigenfind, P. Durek, E. Weber, W. Engelsberger, D. Walther, J. Selbig, W. Schulze and B. Kersten (2010)
Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana.
BMC Genomics 11, 411.

B.B. Schwenk, J. Selbig, Y. Ben-Zion and M. Holschneider (2010)
ExPlanes: exploring planes in triplet data.
Journal of integrative bioinformatics 7.

M. Steinfath, T. Gärtner, J. Lisec, R. Meyer, T. Altmann, L. Willmitzer and J. Selbig (2010)
Prediction of hybrid biomass in Arabidopsis thaliana by selected parental SNP and metabolic markers.
TAG Theoretical and Applied Genetics 120, 239–247.

M. Steinfath, N. Strehmel, R. Peters, N. Schauer, D. Groth, J. Hummel, M. Steup, J. Selbig, J. Kopka, P. Geigenberger and J.T. Van Dongen (2010)
Discovering plant metabolic biomarkers for phenotype prediction using an untargeted approach.
Plant Biotechnology Journal 8, 900–911.